ADDIS: A decision support system for evidence-based medicine

https://doi.org/10.1016/j.dss.2012.10.005Get rights and content

Abstract

Clinical trials are the main source of information for the efficacy and safety evaluation of medical treatments. Although they are of pivotal importance in evidence-based medicine, there is a lack of usable information systems providing data-analysis and decision support capabilities for aggregate clinical trial results. This is partly caused by unavailability (i) of trial data in a structured format suitable for re-analysis, and (ii) of a complete data model for aggregate level results. In this paper, we develop a unifying data model that enables the development of evidence-based decision support in the absence of a complete data model. We describe the supported decision processes and show how these are implemented in the open source ADDIS software. ADDIS enables semi-automated construction of meta-analyses, network meta-analyses and benefit–risk decision models, and provides visualization of all results.

Highlights

► We propose the ADDIS decision support system for the evaluation of medicines. ► A unifying data model captures the requirements of evidence-based decision support. ► Decision support in ADDIS is based on the meta-analysis of clinical trials.

Introduction

Two kinds of decision support systems for evidence-based medicine can be distinguished: rule-based systems for supporting operational decisions of practicing physicians and strategic decision support systems. The rule-based systems represent clinical knowledge and include inference rules for aiding professional decision making in clinical practice. They have been in existence since the 1970s [61]. The most common of these are Computerized Physician Order Entry (CPOE) systems which contain evidence-based rules that enable issuing warnings when an inappropriate combination of medicines is prescribed. To the best of our knowledge, there are no established systems that inform strategic (rather than operational) decisions such as identifying the best treatment practices based on the consideration of benefit–risk trade-offs.

Strategic health care decision making, with or without a supporting system, depends heavily on the availability of unbiased evidence from controlled clinical trials [27]. One of the core activities and sources of information in evidence-based medicine is the systematic review [70], a literature review that attempts to identify and synthesize all empirical evidence that fits pre-specified eligibility criteria in order to answer a specific research question [31]. Currently the process of systematic review is extremely labor intensive and error prone due to the lack of a comprehensive source of clinical trials, the inaccuracy of literature searches, interpretation issues, tedious manual data extraction and, importantly, the duplication of effort that is necessary for every review [62]. The emergence of clinical trial registries [82] and the move towards a more open clinical research community [25], [63], as well as the initiatives of the Cochrane foundation [26] to share and update meta-analysis data sets offer opportunities for more efficient approaches to evidence synthesis. Still, to date there is no single complete collection of performed clinical trials and outcome data, and importantly none of the available sources store results in a format that is suited for re-analysis [80], [82].

Thus, although suitable methods for evidence-based strategy decision support exist [15], [53], [74], [78], evidence-based decision making is difficult to implement because of the substantial effort required to systematically review the literature for relevant studies and to manually extract the data from these studies, which has to be done on a case by case basis. Even when a relevant published systematic review exists, evidence-based decision making including multiple (possibly conflicting) objectives is difficult and in practice often done ad hoc due to a lack of supporting information technology. In addition, sometimes it will be necessary to incorporate additional studies to the body of evidence present in the systematic review, e.g. in the regulatory context where the manufacturer sponsors studies to prove the efficacy and safety of a newly developed drug. Moreover, the analyses reported in the published systematic review may not be valid for the decision at hand, so re-analysis of the included clinical trials may be needed. Text-based reports of systematic reviews do not support such use cases. There do exist methods for automated extraction of trial design and results from the literature, but although the field is rapidly evolving (see e.g. [37]), their accuracy is not yet sufficient to be directly used in systems supporting strategic decisions.

In this paper, we present ADDIS (Aggregate Data Drug Information System, http://drugis.org/addis), an open source evidence-based drug oriented strategy decision support system. It is an integrated software application that provides decision support for strategic decisions such as guideline formulation, marketing authorization, and reimbursement. ADDIS stores aggregate clinical trial results with a unifying data model, and implements semi-automated evidence synthesis and benefit–risk modeling. These use cases were derived from direct discussion with experts from pharmaceutical industry, regulatory authorities, and academia, and from their feedback to early prototypes of the system. Before the models can be applied, trial results must be available in the system; for this, we present an assisted procedure for importing study designs from an existing database. The evidence synthesis and decision models of ADDIS allow decision makers to visualize and understand the available evidence and the trade-offs between different treatment options, thus addressing information overload and reducing the complexity of strategy decisions informed by clinical evidence. We stress that ADDIS does not aim at operational decision support, but aids in strategic decision making and provides a platform for computational methods in clinical trial informatics. In addition, the generation of the models cannot be completely automated: some steps require decisions from a domain expert, but can be supported by ADDIS as will be shown in this paper. To the best of our knowledge, ADDIS is the first system to allow on demand generation and use of the evidence synthesis and decision support models in a suitable way for strategic decision making.

We start by discussing existing systems and standards for clinical trial design and results in Section 2. The unifying data model is presented in Section 3. After that, in Section 4, we present ADDIS and the assisted procedures of study import and generation of evidence synthesis and benefit–risk models. In Section 5 we summarize our principal findings and propose directions for future research.

Section snippets

Background

Several systems and standards dealing with clinical trial information exist. We provide an overview of these systems and standards in 2.1 Clinical trial information systems, 2.2 Standards and data models, respectively. Subsequently, in Section 2.3, we briefly describe the current state of methods for extraction of information from predominantly text-based sources of clinical trial designs and results. Finally, 2.4 Evidence synthesis, 2.5 Decision models give an overview of the most relevant

The unifying data model

We developed a unifying data model to enable evidence-based decision support methods based on either individual studies or evidence synthesis. As discussed before, the most important methods are pair-wise meta-analysis, network meta-analysis, and stochastic multi-criteria benefit–risk assessment. The data model is aimed at supporting these use cases. As was shown in Section 2.2, several worthwhile data modeling efforts are underway. Unfortunately none of them have the needed level of modeling

ADDIS decision support system

The unifying data model together with a semi-automated analysis generation system is implemented in the open source decision support software ADDIS.1 It provides an easy interface to enter, import and manage study design and outcome information from clinical trials, and is specifically aimed at supporting the user in creating (network) meta-analyses and (multi-criteria) benefit–risk models. The main

Discussion

In this paper we introduced ADDIS, a decision support system for evidence-based medicine. ADDIS was developed in the context of a scientific project aimed to enable better use of information technology in the transfer and analysis of clinical trials design and results. The long term vision was developed in collaboration with a steering group composed of experts from the pharmaceutical industry, academia and the regulatory environment. Short term plans were developed with our ‘customer’, a

Role of the funding source

This study was performed in the context of the Escher project (T6-202), a project of the Dutch Top Institute Pharma. The funding source had no direct involvement with the research presented in this paper.

Gert van Valkenhoef is a PhD student for the Escher project of Top Institute Pharma, working on evidence-based decision support for medicines regulation. He has an MSc in Artificial Intelligence.

References (83)

  • Biomedical Research Integrated Domain Group (BRIDG)

    BRIDG Model Release 3.0.3 Users Guide

  • O. Bodenreider

    The Unified Medical Language System (UMLS): integrating biomedical terminology

    Nucleic Acids Research

    (2004)
  • D.M. Caldwell et al.

    Simultaneous comparison of multiple treatments: combining direct and indirect evidence

    BMJ

    (2005)
  • D.M. Caldwell et al.

    Mixed treatment comparison analysis provides internally coherent treatment effect estimates based on overviews of reviews and can reveal inconsistency

    Journal of Clinical Epidemiology

    (2010)
  • S. Carini et al.

    Development and evaluation of a study design typology for human research

  • CDISC

    CDISC 2004 research project on attitudes, adoption, and usage of data collection technologies and data interchange standards; executive summary

    (Sept 2005)
  • CDISC and FDA

    Walking down the critical path: the application of data standards to FDA submissions, a discussion paper by CDISC and FDA

  • A.-W. Chan

    Bias, spin, and misreporting: time for full access to trial protocols and results

    PLoS Medicine

    (2008)
  • J.J. Cimino

    Review paper: coding systems in health care

    Methods of Information in Medicine

    (1996)
  • A. Cipriani et al.

    Comparative efficacy and acceptability of 12 new-generation antidepressants: a multiple-treatments meta-analysis

    Lancet

    (2009)
  • ClinicalTrials gov

    Linking to clinicaltrials.gov [online]

  • ClinicalTrials.gov

    ClinicalTrials.gov protocol data element definitions (draft) [online]

  • A.M. Cohen et al.

    A survey of current work in biomedical text mining

    Briefings in Bioinformatics

    (2005)
  • N. Cooper et al.

    Use of evidence in decision models: an appraisal of health technology assessments in the UK since 1997

    Journal of Health Services Research & Policy

    (2005)
  • P.M. Coplan et al.

    Development of a framework for enhancing the transparency, reproducibility and communication of the benefit–risk balance of medicines

    Clinical Pharmacology and Therapeutics

    (2011)
  • S. Dias et al.

    Checking consistency in mixed treatment comparison meta-analysis

    Statistics in Medicine

    (2010)
  • K. Dickersin et al.

    Registering clinical trials

    Journal of the American Medical Informatics Association

    (2003)
  • K. Dickersin et al.

    Development of the Cochrane Collaboration's central register of controlled clinical trials

    Evaluation & the Health Professions

    (2002)
  • M. Egger et al.

    Meta-analysis: principles and procedures

    BMJ

    (1997)
  • H.-G. Eichler et al.

    Balancing early market access to new drugs with the need for benefit/risk data: a mounting dilemma

    Nature Reviews. Drug Discovery

    (2008)
  • K. El Emam et al.

    The use of electronic data capture tools in clinical trials: web-survey of 259 Canadian trials

    Journal of Medical Internet Research

    (2009)
  • FDA

    US Food and Drug Administration Amendments Act (FDAAA), Section 801

    (2007)
  • FDA

    Guidance for industry: providing regulatory submissions in electronic format drug establishment registration and drug listing, US Food and Drug Administration (FDA)

  • J.C. Felli et al.

    A multiattribute model for evaluating the benefit–risk profiles of treatment alternatives

    Medical Decision Making

    (2009)
  • D. Ghersi et al.

    Reporting the findings of clinical trials: a discussion paper

    Bulletin of the World Health Organization

    (2008)
  • J.M. Grimshaw et al.

    Knowledge for knowledge translation: the role of the Cochrane Collaboration

    The Journal of Continuing Education in the Health Professions

    (2006)
  • Evidence-Based Medicine Working Group

    Evidence-based medicine. A new approach to teaching the practice of medicine

    Journal of the American Medical Association

    (1992)
  • J.J. Guo et al.

    A Review of quantitative risk–benefit methodologies for assessing drug safety and efficacy—report of the ISPOR Risk–Benefit Management Working Group

    Value in Health

    (2010)
  • R.B. Haynes et al.

    Clinical expertise in the era of evidence-based medicine and patient choice

    Evidence-Based Medicine

    (2002)
  • R.B. Haynes et al.

    Optimal search strategies for retrieving scientifically strong studies of treatment from Medline: analytical survey

    BMJ

    (2005)
  • Cochrane Handbook for Systematic Reviews of Interventions Version 5.0.2

  • P.K. Honig

    Systematic reviews and meta-analyses in the new age of transparency

    Clinical Pharmacology and Therapeutics

    (2010)
  • ICTRP

    About trial registration: organizations with policies [online]

  • J.P.A. Ioannidis

    Integration of evidence from multiple meta-analyses: a primer on umbrella reviews, treatment networks and multiple treatments meta-analyses

    Canadian Medical Association Journal

    (2009)
  • A.R. Jadad et al.

    Methodology and reports of systematic reviews and meta-analyses: a comparison of Cochrane reviews with articles published in paper-based journals

    Journal of the American Medical Association

    (1998)
  • J. Kaiser

    Making clinical data widely available

    Science

    (2008)
  • S. Kiritchenko et al.

    ExaCT: automatic extraction of clinical trial characteristics from journal publications

    BMC Medical Informatics and Decision Making

    (2010)
  • Y.M. Kong et al.

    Toward an ontology-based framework for clinical research databases

    Journal of Biomedical Informatics

    (2011)
  • K. Krleza-Jeric et al.

    Principles for international registration of protocol information and results from human trials of health related interventions: Ottawa statement (part 1)

    BMJ

    (2005)
  • R. Lahdelma et al.

    SMAA-2: stochastic multicriteria acceptability analysis for group decision making

    Operations Research

    (2001)
  • R. Lahdelma et al.

    SMAA — stochastic multiobjective acceptability analysis

    European Journal of Operational Research

    (1998)
  • Cited by (0)

    Gert van Valkenhoef is a PhD student for the Escher project of Top Institute Pharma, working on evidence-based decision support for medicines regulation. He has an MSc in Artificial Intelligence.

    Tommi Tervonen is an Assistant Professor at the Econometric Institute of Erasmus University Rotterdam. He received a double-degree PhD in 2007 from the universities of Turku (Computer Science) and Coimbra (Management Science). His main research interests are theory of MCDA (especially SMAA methods), MCDA in drug benefit–risk analysis, and medical informatics.

    Tijs Zwinkels is a freelance Artificial Intelligence researcher and mobile applications developer. He has an MSc in Artificial Intelligence and extensive software development experience for commercial employers as well as open source projects.

    Bert de Brock is a professor of Business Information Modelling at the University of Groningen. He is interested in databases and information modeling and interdisciplinary applications to bioinformatics and medicine.

    Hans Hillege is a professor of Cardiology at the University Medical Center Groningen. There, he is also director of the Trial Coordination Center and head of the Data-Management Project. Moreover, he is a clinical assessor for the Dutch Medicines Evaluation Board and clinical expert for the European Medicines Agency (EMA).

    View full text