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Post hoc analyses of surrogate markers of non-alcoholic fatty liver disease (NAFLD) and liver fibrosis in patients with type 2 diabetes in a digitally supported continuous care intervention: an open-label, non-randomised controlled study
  1. Eduardo Vilar-Gomez1,
  2. Shaminie J Athinarayanan2,
  3. Rebecca N Adams2,
  4. Sarah J Hallberg2,3,
  5. Nasir H Bhanpuri2,
  6. Amy L McKenzie2,
  7. Wayne W Campbell4,
  8. James P McCarter2,5,
  9. Stephen D Phinney2,
  10. Jeff S Volek2,6,
  11. Naga Chalasani1
  1. 1 Division of Gastroenterology and Hepatology, Indiana University School of Medicine, Indianapolis, Indiana, USA
  2. 2 Virta Health, San Francisco, California, USA
  3. 3 Indiana University Health Arnett, Lafayette, Indiana, USA
  4. 4 Department of Nutrition Science, Purdue University, West Lafayette, Indiana, USA
  5. 5 Department of Genetics, Washington University School of Medicine, St. Louis, Missouri, USA
  6. 6 Department of Human Sciences, Ohio State University, Columbus, Ohio, USA
  1. Correspondence to Professor Naga Chalasani; nchalasa{at}


Objective One year of comprehensive continuous care intervention (CCI) through nutritional ketosis improves glycosylated haemoglobin(HbA1c), body weight and liver enzymes among patients with type 2 diabetes (T2D). Here, we report the effect of the CCI on surrogate scores of non-alcoholic fatty liver disease (NAFLD) and liver fibrosis.

Methods This was a non-randomised longitudinal study, including adults with T2D who were self-enrolled to the CCI (n=262) or to receive usual care (UC, n=87) during 1 year. An NAFLD liver fat score (N-LFS) >−0.640 defined the presence of fatty liver. An NAFLD fibrosis score (NFS) of >0.675 identified subjects with advanced fibrosis. Changes in N-LFS and NFS at 1 year were the main endpoints.

Results At baseline, NAFLD was present in 95% of patients in the CCI and 90% of patients in the UC. At 1 year, weight loss of ≥5% was achieved in 79% of patients in the CCI versus 19% of patients in UC (p<0.001). N-LFS mean score was reduced in the CCI group (−1.95±0.22, p<0.001), whereas it was not changed in the UC (0.47±0.41, p=0.26) (CCI vs UC, p<0.001). NFS was reduced in the CCI group (−0.65±0.06, p<0.001) compared with UC (0.26±0.11, p=0.02) (p<0.001 between two groups). In the CCI group, the percentage of individuals with a low probability of advanced fibrosis increased from 18% at baseline to 33% at 1 year (p<0.001).

Conclusions One year of a digitally supported CCI significantly improved surrogates of NAFLD and advanced fibrosis in patients with T2D.

Trial registration number NCT02519309; Results.

  • type 2 diabetes
  • very low carb diet
  • ketogenic diet
  • non-alcoholic fatty liver disease
  • liver fibrosis
  • weight loss

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Strengths and limitations of this study

  • This is a longitudinal study including 262 continuous care intervention and 87 usual care patients with type 2 diabetes who have higher risk in developing non-alcoholic fatty liver disease (NAFLD).

  • This study performed exploratory association analyses to demonstrate the relationship between glycaemic improvements and improvements in alanine aminotransferase levels.

  • The assessment of resolution of steatosis and fibrosis is limited by the sensitivity and specificity of the non-invasive markers used in the study.

  • The patients were restricted in their carbohydrate intake and monitored for their nutritional ketosis state, but dietary energy, macronutrient and micronutrient intakes were not assessed.


Non-alcoholic fatty liver disease (NAFLD) is an important cause of chronic liver disease, hepatocellular carcinoma and liver transplant worldwide and is associated with increased risk of heart disease, diabetes, chronic kidney disease and malignancies.1–4 NAFLD is highly prevalent (~70%) among patients with obesity and type 2 diabetes (T2D).5 T2D is usually associated with the more aggressive form of NAFLD, including non-alcoholic steatohepatitis (NASH; indicating significant hepatocellular injury) and advanced fibrosis6 and is linked with high risk for all-cause and liver-related mortality.7–10 Currently, there are no approved pharmacological interventions for NASH. Weight loss (WL) via lifestyle changes including dietary modification and exercise is the first-line intervention used in treating and improving NAFLD/NASH.11 12 However, the majority of patients do not achieve or sustain targeted WL goals.11 13 Previous studies show a close relationship between the degree of weight reduction and improvements in most of the NASH-related features, including steatosis, inflammation, fibrosis, insulin resistance and elevated liver enzymes, irrespective of the type of diet consumed.13–22 However, there is an intense debate about what types of diet are most effective for treating NASH and, to date, the optimal degree of energy restriction and macronutrient composition of dietary interventions in subjects with NASH and T2D are not well defined.12

Low-carbohydrate, high-fat (LCHF) and ketogenic diets have demonstrated a superior WL effect to low-fat, high-carbohydrate diets in adults with overweight and obesity23–26 and short-term interventions with very low carbohydrate diets are associated with improved insulin sensitivity and glycaemic control.27 28 Lower consumption of carbohydrate, LCHF and ketogenic diets improve appetite control, satiety and/or reduce daily food intake helping to limit dietary energy consumption while maintaining patient-perceived vigour.29 In patients with NAFLD, the beneficial effects of LCHF diets on liver enzymes and intrahepatic lipid content (IHLC) have been explored with contradictory results. Among studies with varied carbohydrate intakes, some reported a significant reduction of aminotransferases,16 30–32 while others did not report significant changes in these enzymes.17 33 34 A recent meta-analysis of pooled data from 10 clinical trials reported that low carbohydrate diet (LCD) in patients with NAFLD led to a significant reduction in IHLC.35

We recently demonstrated that 1 year of a telemedicine-based comprehensive continuous care intervention (CCI) with carbohydrate restriction-induced ketosis and behaviour change support significantly reduced glycosylated haemoglobin (HbA1c) level and medication usage in patients with T2D.36 The effectiveness of the CCI relies in maintaining a carbohydrate-restricted diet and monitoring compliance with the dietary regimen by assessing the patient’s nutritional ketosis by blood tests during the year. We also demonstrated that 1 year of the CCI was effective in improving liver enzymes, where mean alanine aminotransferase (ALT), aspartate aminotransferase (AST) and alkaline phosphatase (ALP) were reduced by 29%, 20% and 13%, all p<0.01, respectively. These findings highlight the beneficial effect of the CCI on diabetes management and in ameliorating the liver-related injury. These changes were not reported in the usual care (UC) patients receiving standard diabetes care treatment. Therefore, in the current post hoc analysis, we assessed 1 year within-group and between-group (CCI vs UC) differences in non-invasive liver markers of steatosis (NAFLD liver fat score (N-LFS)) and fibrosis (NAFLD fibrosis score (NFS)) in the full study sample (CCI and UC cohorts). In addition, we assessed these outcomes in the subgroup of patients with abnormal ALT at baseline (ALT levels of >30 U/L in men and >19 U/L in women). Among all patients, ancillary aims included assessing if changes in weight and HbA1c were associated with ALT and metabolic parameter improvements and potential relationships between changes in the ALT with other metabolic parameters.


The design and primary results of this study were previously published, and the current results are based on a 1-year post hoc analysis using the data collected from the same cohort in that clinical study ( identifier: NCT02519309).36 A brief description of the study design, participants and interventions are listed in the online supplementary appendix (methods section). Briefly, this was a non-randomised and open-label controlled longitudinal study, including patients 21–65 years of age with a diagnosis of T2D and a body mass index (BMI) of >25 kg/m2. Furthermore, patients were excluded if they had significant alcohol intake (average consumption of three or more alcohol-containing beverages daily or consumption of more than 14 standard drinks per week), presence of any other cause of liver disease or secondary causes of NAFLD and decompensated cirrhosis.

Supplementary file 1

Patient and public involvement

Patients were not involved in the design and implementation of the study. Patient participants have been thanked for their participation in all resulting manuscripts and will receive information on publications on study completion.

Study recruitment and intervention

Patients participating in the CCI had access to a remote care team consisting of a personal health coach and medical providers (physician or nurse practitioner). The participants in the CCI self-selected between two different educational modes, either via on-site education classes (n=136, CCI on-site) or via web-based educational content (n=126, CCI virtual). The CCI patients were routinely assessed for nutritional ketosis based on blood beta-hydroxybutyrate (BHB) concentrations. We also recruited and followed a cohort of UC patients with T2D (n=87) who received a standard diabetes care treatment from their primary care physician or endocrinologist without modification.36 37


Primary outcomes: NAFLD liver fat and liver fibrosis by non-invasive surrogate markers

N-LFS is a surrogate marker of fatty liver that includes the presence of the metabolic syndrome, T2D, fasting serum insulin, AST and the AST/ALT ratio. An N-LFS cut-off of >−0.640 predicts liver fat (>5.56% of hepatocytes) with a sensitivity of 86% and specificity of 71%.38 39 NFS is a widely validated biomarker for identifying patients at different risks of fibrosis severity. NFS is derived from age, BMI, hyperglycaemia, the AST/ALT ratio, platelet and albumin. The NFS threshold of <−1.455 can reliably exclude patients with advanced fibrosis (negative predictive value ≈92%) and >0.675 can accurately detect subjects with advanced fibrosis (positive predictive value ≈85%).40–42 The equations for calculating both scores are displayed in the online supplementary appendix (methods section).

Ancillary outcomes: other biochemical markers

Results from other metabolic (HbA1c, fasting glucose, fasting insulin, homeostatic model assessment-insulin resistance (HOMA-IR), triglycerides, total cholesterol, high-density lipoprotein (HDL) cholesterol and low-density lipoprotein cholesterol), liver (ALT, AST and ALP), kidney (creatinine and estimated glomerular filtration rate (eGFR)), BHB and high-sensitivity C reactive protein parameters were previously published in the full CCI and UC cohort.36 These additional biochemical markers were assessed in the subset analyses of patients with abnormal ALT at baseline.43

Statistical analyses

First, we examined the assumptions of normality and linearity. According to Kline’s guidelines,44 seven outcomes (ie, N-LFS, ALT, AST, fasting insulin, triglycerides, C reactive protein and BHB) were positively skewed. We explored two approaches to handling the skewed variables: natural log-transformations and removing the top 1% of values. For N-LFS, which includes both positive and negative values, a modulus log-transformation45 was performed instead of a natural log-transformation. For every variable except triglycerides, both approaches resulted in new skew and kurtosis values falling within the acceptable range. We conducted sensitivity analyses related to our first aim to compare the two approaches. The results did not differ between the two approaches, and to make interpretation feasible, we report results from the approach of removing the top 1% of values for the linear mixed-effects model (LMM) analyses. For triglycerides, analyses were performed on the log-transformed variable; p values reported are based on analyses with the transformed variable, but the means and SEs reported were computed from the original variable without any adjustments. For both analysis of covariance (ANCOVA) and correlation analyses, the natural or modulus log-transformed variables were used to determine the association.

The first aim of the study was to examine: (1) within-group changes in the study outcomes from baseline to 1 year and (2) between-group differences (CCI vs UC) in the study outcomes at 1 year. The on-site and virtual CCI patients were grouped together for analyses since no significant differences were observed in biochemical markers between these two modes of educational delivery.36 We performed LMMs in SPSS statistics software to estimate the within-group and between-group differences. The LMMs included fixed effects for time, group (CCI vs UC) and time by group interaction. Covariates included baseline age, sex, race (African-American vs other), diabetes duration, BMI and insulin use. This maximum likelihood-based approach uses all available repeated data, resulting in an intent-to-treat analysis. An unstructured covariance structure was specified for all models to account for correlations between repeated measures. Most analyses were conducted on a subsample of participants with abnormal (>30 U/L in men and >19 U/L in women)46 ALT at baseline (195 of 347; 157 CCI and 38 UC). We also conducted analyses assessing changes in N-LFS, NFS, albumin and platelets on the full study sample because results were not previously reported. In addition, we examined changes in the proportions of participants meeting clinically relevant cut-offs for N-LFS, NFS and ALT. Within-group changes in the proportions from baseline to 1 year were assessed using McNemar’s test. Between-group differences in proportions were assessed using χ2 test. For this set of analyses, multiple imputation (20 imputations) was used to replace missing values from baseline and 1 year with a set of plausible values, facilitating an intent-to-treat analysis.

The second study aim was to explore relationships between: (1) changes in WL and HbA1c categories and its associations with ALT and metabolic parameters improvements and (2) changes in ALT and metabolic variables. Multiple imputation was also used to handle missing data for aim two analyses. We performed one-way longitudinal ANCOVA analyses for comparisons between different cutoffs of WL (<5%, 5%–10% and >10%) and with changes in diabetes-related and liver-related continuous variables. Covariates included baseline value of the dependent variables and BMI. Trend analyses were performed using Mantel-Haenszel χ2 tests to assess changes in the proportions of patients meeting clinical cut-offs (for ALT, N-LFS and NFS normalisation) within different weight and HbA1c categories. An adjusted OR was calculated to measure the strength of association between HbA1c changes and ALT normalisation using logistic regression. The logistic regression analysis was adjusted by BMI, age, gender and baseline dependent covariates. Unadjusted and adjusted Pearsons’ correlations were performed to identify relationships between changes in ALT levels and changes in metabolic-related and lipid-related parameters from baseline to 1 year. Adjusted correlations were also performed while controlling for baseline dependent covariates, baseline age, sex, race (African-American vs other), diabetes duration, BMI and insulin use. All CIs, significance tests and resulting p values were two sided, with an alpha level of 0.05. A Bonferroni correction was applied to each set of analyses (LMM or ANCOVA) to control the family-wise error rate. The Bonferroni adjusted p value=0.05/19 variables=0.0025 was used to determine statistical significance for each set of hypothesis-driven analyses.


Baseline features of participants

Recruitment and baseline results were published previously.36 Briefly, between August 2015 and April 2016, 262 and 87 patients were enrolled in the CCI and UC groups, respectively. Online supplementary figure 1 shows the flow of patients through the study. At baseline, average age was 53.4±8.7 years and 226 participants (65%) were female. The average time since T2D diagnosis was 8.3±7.2 years and 314 subjects (90%) were obese with a mean BMI of 39.5.36 Two hundred and ninety-three participants (84%) were on medication for diabetes, and 118 (34%) were insulin users.36 The proportion of patients with abnormal ALT was higher in CCI (58%) compared with the UC (44%). At baseline, 330 subjects (95%) had suspicion of NAFLD and fewer patients (69 of 349 (20%)) had a NFS threshold of <−1.455 indicating low probability of advanced fibrosis. Compared with UC, mean baseline BMI was significantly higher in patients in the CCI. The remaining patient demographics and baseline features were generally not different between the two groups.36 47

Influence of intervention and time on 1-year study endpoints

Non-invasive markers of steatosis (N-LFS) and NAFLD fibrosis (NFS)

After 1 year, the CCI decreased N-LFS and NFS for the full cohort and among patients with abnormal ALT at baseline, whereas no changes were observed in the UC full cohort or subset (table 1). There were significant between group (CCI vs UC) differences in N-LFS and NFS observed in both the full and abnormal baseline ALT cohort at 1 year (table 1). Notably, the proportion of patients with suspected steatosis reduced from 95% to 75% at 1 year in the CCI, whereas no change occurred in UC. At 1 year, the proportion of patients without fibrosis increased from 18% to 33% in CCI group, p<0.001, but no change occurred in the UC. Similar to the full cohort, the proportion of patients with suspected steatosis was reduced from 99% to 76%, p<0.001, and proportion of those without fibrosis increased from 20% to 37%, p<0.001, through 1 year among CCI patients with abnormal ALT levels (table 2). Between-group (CCI vs UC) differences at 1 year are listed in table 1.

Table 1

Estimated marginal means and mean changes in metabolic, liver-related and non-invasive markers at baseline and after 1 year of the CCI and UC interventions

Table 2

Resolution of abnormal ALT, steatosis and fibrosis (as estimated using non-invasive liver markers cut-off) from baseline to 1 year in continuous care intervention (CCI) and usual care (UC)

Metabolic parameters

At 1 year, beneficial changes observed in the metabolic parameters of the full CCI cohort36 47 were also reported in the subset of patients with abnormal baseline ALT, including reduction of HbA1c, fasting glucose, fasting insulin, HOMA-IR, triglycerides (all p<0.001) and increase of HDL cholesterol (p<0.001) (table 1). No changes in metabolic parameters were observed in the UC group. Between-group (CCI vs UC) differences at 1 year are listed in table 1.

Other liver-related, kidney function tests and parameters

Among CCI patients with abnormal ALT at baseline, significant reductions in the liver enzymes were observed (table 1), as previously reported in the full CCI cohort. No changes in liver-related tests were observed in the UC group. Among patients with increased ALT levels at baseline, 93 (61%) of 153 participants enrolled in the CCI versus 3 (8%) of 38 patients in UC had ALT normalisation at 1 year (table 2). Significant within-CCI changes were observed for albumin and platelet in the full CCI cohort, whereas in the subsample of patients with abnormal baseline ALT, there was only a significant decrease in the platelet (table 1). As reported in the full CCI cohort,36 significant changes in C reactive protein and BHB concentrations were found in the subset of CCI patients with abnormal baseline ALT over 1 year. These changes were not found in the UC group. When adjusted for multiple comparisons, no significant changes in creatinine or eGFR were found in either the CCI or UC group. Between-group differences at 1 year are listed in table 1.

Associations between WL and study outcomes in the CCI group

At 1 year, WL of ≥5% was achieved in 79% of CCI patients with 54% achieving WL of ≥10%. The proportion of patients losing weight was lower in the UC group with only 17 UC participants (19.5%) achieving ≥5% WL and only 4 (6%) with ≥10% WL (online supplementary figure 2). In the CCI group, there was a trend towards greater mean percentage WL by higher baseline BMI classification, especially in patients losing more than 5% or 10% of body weight (online supplementary table 1). As shown in table 3, there were relationship trends between the degree of 1 year of WL (%) and changes in liver, metabolic and non-invasive markers of steatosis and fibrosis among CCI participants. At 1 year, the CCI patients who achieved WL ≥10% showed the greatest reductions in N-LFS (p<0.001) and NFS (p<0.001), whereas no statistically significant differences were found between patients with WL from 5% to 10% versus <5%. Similarly, patients who achieved WL ≥10% also showed decreases in HbA1c (p<0.001) and triglycerides (p<0.001) from baseline to 1 year. The 1-year probability of suspected fatty liver (N-LFS >−0.64) was lower (66%) among patients with WL ≥10% compared with the other WL groups (<5% (85%) and 5%–10% (86%)). The proportion of patients with low likelihood of fibrosis at 1 year was higher among patients with WL ≥10% (41%) versus patients with WL of 5%–10% (26%) and <5% (22%).

Table 3

One-year associations between weight loss (%) and changes in liver-related and diabetes-related variables

Correlation analyses between changes in ALT levels with changes in metabolic parameters in the CCI group

In the CCI group, changes in HbA1c, weight and fasting glucose from baseline to 1 year were associated with changes in ALT levels in the full cohort (HbA1c: r=0.148, p=0.03; weight: r=0.198, p=0.004; fasting glucose: r=0.176, p=0.004) and among patients with abnormal levels of ALT at baseline (HbA1c: r=0.253, p=0.005; weight: r=0.278, p=0.003, fasting glucose: r=0.305, p<0.001) (table 4). Changes in other lipid markers did not correlate with changes in ALT levels (table 4). Figure 1A–D displays 1-year associations between change in HbA1c and normalisation of ALT levels. In the full CCI group, 141 (70%) of 201 patients with HbA1c reductions of ≥ 0.5% at 1 year had normal ALT levels (figure 1A). Among CCI patients with abnormal ALT levels at baseline, 77 (65%) of 119 patients with a reduction of ≥ 0.5% in HbA1c showed normalisation of ALT levels (figure 1B). One-year reduction of ≥0.5% in HbA1c increased the odds of ALT normalisation 2.4-fold (95% CI 1.09 to 5.3) after controlling for baseline levels of HbA1c, BMI, ALT, diabetes duration, insulin use and WL (%) at 1 year. Given that weight reductions (≥ 5%) can be associated with changes in HbA1c level, we sought to explore whether a reduction of ≥ 0.5% in HbA1c was still associated with ALT normalisation, independent of WL (≥5%) (figure 1C,D). A reduction of ≥0.5% in HbA1c was associated with higher rates of ALT normalisation, regardless of whether or not 5% WL was achieved (p<0.001).

Table 4

Correlations change in ALT and changes in metabolic parameters

Figure 1

Association between reduction in HbA1c (%) and normalisation of ALT* levels at 1 year of intervention in CCI group. (A) Full CCI cohort (n=272). Higher proportion of patients with ALT normalisation were observed in HbA1c (%) reduction categories 0.5%–1.0%; 71% and >1.0%; 70%. (B) CCI patients with increased levels of ALT at baseline (n=153). higher proportion of patients with ALT normalisation were observed in HbA1c (%) reduction categories 0.5%–1.0%; 67% and >1.0%; 64%. Adjusted OR for change in HbA1c >0.5%=2.4 (95% CI 1.09 to 5.3), p=0.029. (C) CCI patients with weight loss ≥5% (n=207). Among patients with weight loss >5%, higher levels of ALT normalisation (85%) were observed in patients with HbA1c (%) reduction of >0.5%. (D) CCI patients with increased levels of ALT at baseline and weight loss ≥5% (n=123). Among patients with weight loss >5% and abnormal ALT levels at baseline, higher levels of ALT normalisation (86%) were observed in patients with HbA1c (%) reduction of >0.5%. *ALT levels <19 in women and <30 in men. ALT, alanine aminotransferase; CCI, continuous care intervention; HbA1c, glycosylated haemoglobin.


Adverse events during this trial were previously reported.36 Mean platelet count was reduced in the CCI (−22.9±2.3, p<0.001) versus UC group (−11.1±3.9, p=0.005); however, the proportion of patients with a platelet count below 150×109 L was not different between groups. There was no hepatic decompensation (variceal haemorrhage, ascites or hepatic encephalopathy) or ALT flare-up (>5 times the upper limit of normal) reported during the trial in either the CCI or UC group.


The findings of the current analysis show that 1 year of a digitally supported CCI reduced risk of fatty liver and advanced liver fibrosis in overweight and obese adults with T2D. Improvements were concurrent with improved glycaemic status, reduction in cardiovascular risk factors and decreased use of medications for diabetes and hypertension.36 47 The beneficial effects extended to patients with increased levels of aminotransferase, thus indicating that remote care medically supervised ketosis is also effective in patients at risk of liver disease progression. The influence of carbohydrate restriction and nutritional ketosis on liver histology of patients with biopsy-proven NASH remains largely unexplored in the context of a well-designed randomised controlled trial. A pilot study including five patients with biopsy-proven NASH showed that 6 months of ketogenic diet (KD) (less than 20 g per day of carbohydrate) induced significant WL (mean of 13 kg) and four of five patients reduced liver fat, inflammation and fibrosis.33 The current study provides evidence that a remote-care medically supervised KD can improve NASH and even fibrosis. A recent meta-analysis of 10 studies reported the effects of LCD on liver function tests in patients with NAFLD and concluded that LCD reduced IHLC but did not improve liver enzymes,35 although heterogeneity among NAFLD populations and interventions were observed across the included studies.

Among CCI participants, correlations were also found between the improvements in HbA1c and ALT changes, even after controlling for WL and changes in insulin use. Among subjects with abnormal ALT levels at baseline, a reduction of ≥0.5% in HbA1c was associated with increased rates of ALT normalisation. This finding suggests that liver enzyme improvements may be related to improvements in glycaemic control and insulin concentration in addition to WL. Importantly, few studies have directly compared the metabolic advantages of different diets for the treatment of NAFLD,15 32 48 and the impact of dietary macronutrient composition remains largely unknown. Three studies have shown that low-carbohydrate and low-fat diets reduced liver fat, transaminases and insulin resistance to similar degrees,15 21 48 whereas another study reported that a moderate hypocaloric LCD in insulin-resistant patients improved ALT levels more than a hypocaloric low-fat diet, despite equal WL.48 Among patients with T2D, a ‘moderate-carbohydrate modified Mediterranean diet’ (35% carbohydrates, 45% high monounsaturated fat) showed greater ALT reductions than two other higher carbohydrate hypocaloric diets including the 2003 recommended American Diabetes Association (ADA) or low glycaemic index diets.49

Our results also demonstrated that non-invasive risk scores for fatty liver and fibrosis were improved in patients who underwent CCI as compared with the UC control, and greater reductions were observed in patients with the largest reductions in body weight (≥10%). Our results are consistent with previous studies reporting that LCD reduce intrahepatic lipid accumulation.15 16 21 32 33 Likewise, 1 year liver fibrosis as assessed by NFS improved in the CCI group, and the proportion of patients with low likelihood of fibrosis increased from 18% to 33% at 1 year of intervention. Similar to previous studies addressing the impact of WL on NASH-related fibrosis,13 50 we showed a relationship between the degree of WL and improvements in NFS.

LCD or KD have been proposed to more effectively reduce all features of the metabolic syndrome, which is present in approximately 80% of patients with NAFLD, compared with low-fat diets51 52; however, the physiological mechanisms are not fully established.53–55 In line with our findings, Holland et al 56 showed that irrespective of physical exercise, rats fed a ketogenic formulation had lower liver triglycerides and lower activation of the proinflammatory Nuclear factor kappa Beta (NF-kB) pathway compared with rats fed Western and standard chow diets. Likewise, a recent human study using a 2-week isocaloric carbohydrate restricted diet demonstrated a drastic reduction of hepatic steatosis and a shift in lipid metabolism pathway from de novo lipogenesis to ß-oxidation and increased BHB production.57 This shift in the lipid homeostasis following a short-term ketogenic diet occurred in conjunction with a shift in gut microbia towards increased folate production as well as decreased expression of key serum inflammatory markers.57

Strengths and weaknesses of this clinical trial have been previously described.36 Some strengths of this study include a large cohort of patients with T2D and high suspicion of NAFLD, an intervention with 1 year of digitally supported continuous care including monitored adherence to nutritional ketosis and a control group of patients with T2D provided UC with standard nutritional recommendations.36 Relative to prior outpatient interventions, the current study is unusual in the degree of health coach and physician support, the degree of prescribed carbohydrate restriction and the use of BHB as a blood biomarker of dietary adherence. These attributes may contribute to superior outcomes observed in the intervention group when compared with UC patients. The multicomponent approach used in the intervention encouraged the patient to adapt carbohydrate restriction through continuous monitoring of nutritional ketosis and provided behavioural support through interaction with their health coaches.

Some weaknesses of this study include the absence of imaging-proven or biopsy-proven NAFLD or NASH diagnosis and lack of random allocation to assign patients to intervention and control groups. Food was not provided for participants so dietary macronutrient and micronutrient contents and sources were not strictly controlled.

In conclusion, 1 year of a digitally supported CCI including individualised nutritional ketosis led to significant improvement in non-invasive markers of liver fat and fibrosis together with sustained WL in overweight and obese patients with T2D. A relationship was observed between the degree of WL and improvements in liver-related and non-liver-related outcomes with greater benefits in patients losing more than 10% of body weight. A reduction of ≥0.5% in HbA1c was independently associated with ALT normalisation even after controlling for WL. Medical interventions incorporating ketogenic diets appear effective for improving NAFLD and therefore may be an effective approach for reversing the natural history of NAFLD progression, although further studies are needed to confirm potential beneficial effect in patients with biopsy-confirmed NASH.


Authors would like to thank Drs Marwan Ghabril and Raj Vuppalanchi for their helpful discussions with various analyses. The authors would also like to thank the study participants for their active involvement in the study.


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  • Contributors EV-G, SJA, RNA, JPM and NC wrote the manuscript. ALM, NHB, SJH and SJA participated in data acquisition. EV-G and SJA analysed the data. NC, SJH, NHB, ALM, WWC, JPM, SDP and JSV supervised this particular analysis and edited the manuscript. All authors approved the final version of the manuscript.

  • Funding Virta Health funded this study.

  • Competing interests SJA, SJH, NHB, ALM, RNA, JPM and SDP are employees of Virta Health Corp and have been offered stock options. SDP and JSV are founders of Virta Health Corp. EV-G, WWC and NC have nothing relevant to declare.

  • Patient consent Obtained.

  • Ethics approval Franciscan Health Lafayette Institutional Review Board.

  • Provenance and peer review Not commissioned; externally peer reviewed.

  • Data sharing statement Data sets and statistical code used for the current study are available from the corresponding author on reasonable request.