Elsevier

Autoimmunity Reviews

Volume 5, Issue 8, October 2006, Pages 517-522
Autoimmunity Reviews

Peripheral blood gene expression signature mirrors central nervous system disease: The model of multiple sclerosis

https://doi.org/10.1016/j.autrev.2006.02.009Get rights and content

Abstract

Global gene expression analysis using cDNA microarrays has proven to be a sensitive method to gain insight into molecular pathways mediating multiple sclerosis (MS) activity and to develop and refine the molecular taxonomy of the disease. This method was applied as a tool to investigate molecular heterogeneity of MS related gene transcripts in the aim of distinguishing between transcripts that trigger disease activity and account for direct genotype–phenotype correlation, and those whose expression is altered as a downstream effect of other genes. This review summarizes the current state of gene expression microarray applications for the study of MS, and specifically emphasizes the results of gene expression studies using peripheral blood mononuclear cells (PBMC) that were shown to be useful for better understanding of disease related pathways, monitoring of therapeutic responses to various drugs and prediction of clinical outcome. In the long run it is expected that the information provided by cDNA microarrays experiments will allow the determination of key molecular players involved in MS pathogenesis, and lead to better management of the disease using targeted treatments that will prevent its progression.

Introduction

Multiple sclerosis (MS) is a chronic inflammatory demyelinating autoimmune disease affecting the central nervous system (CNS). MS affects mainly young adults with a peak onset between 20 and 40 years of age. The alterations in the immune system initiated by a loss of immunological tolerance to self-antigens, lead to the development of autoreactive phenomena that can be detected in the peripheral blood. Pathologically, the disease is characterized by perivascular infiltration of monocytes and lymphocytes mainly CD4+ T-cells within the brain and spinal cord that lead to myelin destruction [1]. In MS, peripheral blood mononuclear cells (PBMC) are involved in disease pathogenesis and induce active demyelination. Autoreactive activated T-cells invade the blood–brain barrier and initiate an inflammatory response that leads to myelin destruction and significant neurological disability [2], [3]. Gene expression microarray technology is a new tool for comprehensive evaluation of thousands of genes transcripts simultaneously [4]. In recent years, microarray technology has been used for comprehensive analysis to classify diseases, identify effects of different stimuli or treatments in vivo or in vitro, single out genes that may play a role in a specific disease or in a specific biologic process and was shown as a potent technology also to distinguish transcriptional patterns and complex networks that underlie such processes.

The technology is based on hybridization of mRNA to high-density array of immobilized target sequences. Each sequence corresponds to a specific gene of interest. The labeled pool of sample mRNA is subsequently hybridized to the array and the fluorescence at each spot on the array is quantitatively measured in correspondence to the expression level of each particular gene [5].

Section snippets

Gene expression studies in MS—findings in the brain

The first studies using gene expression arrays in MS looked at the brain and explored the differences between active brain lesions of MS patients with normal subjects white matter. Whitney et al. [6] monitored the expression pattern of over 5000 genes and compared the gene expression profile of normal white matter with that found in acute lesions from the brain of a single MS patient. Sixty-two differentially expressed genes were identified, including the Duffy chemokine receptor, interferon

Gene expression studies in MS—findings in peripheral blood

As brain tissue is not readily available and taking into consideration the evidence that in MS autoreactive PBMC initiate the autoimmune inflammatory process against myelin antigens, it was of importance to evaluate whether transcriptional profiling of PBMC could serve to identify a disease specific diagnostic signature. Identification of MS associated gene expression profiles directly from PBMC could highlight important disease-specific pathways and provide a useful tool for clinical studies

PBMC gene expression pharmacogenomics

Another rapidly growing area in the field of gene expression are practical approaches for evaluating pharmacodynamics effects of immunomodulatory therapies in MS by estimation of individual response of patients to a specific treatment. Wandinger et al. [20] performed gene expression analysis of interferon-beta (IFN-b)-treated PBMC by cDNA microarray and demonstrated that IFN-b up-regulates not only TH2 but also numerous TH1-related pro-inflammatory mediators. Sturzebecher et al. [21] assessed

PBMC gene expression pathogenic pathways

Several investigators have looked on specific pathogenic pathways in MS using PBMC gene expression arrays. Iglesias et al. [26] revealed that several E2F1-dependent genes had enhanced expression in MS PBMC, while PBMC from IFNb-1a treated MS patients had lower expression of E2F targets. As the E2F pathway promotes immune cell survival, the authors suggested that its disruption lead to perpetuation of immune cell dysregulation in MS.

We have studied MS gene expression signature of 1109 gene

Conclusions

Gene expression array-based technologies provided new opportunity to illuminate MS disease transcriptional fingerprints. This could enable the re-construction of biological pathways involved in disease evolvement, enable better understanding of the mechanisms of current drug therapies, reveal new potential targets for therapeutic interventions, and evaluate transcription biomarkers for diagnostic and prediction of clinical outcome in MS patients.

Take-home messages

  • •Peripheral blood mononuclear cells (PBMC) gene expression can be used as a fingerprint of end-organ cerebral neurological disease.

  • •Variation of PBMC gene expression signatures observed in healthy subjects is markedly smaller than those observed among patients, and thus provide robust support for using gene expression patterns for characterization and diagnosis of disease states.

  • •PBMC gene expression patterns in MS patients contain information about a remote-target disease process that may by

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